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I give you one simple trick. Download the FIFA 11 Demo, setup your controller in the launcher and then copy the button data files from FIFA 11 My Documents folder into FIFA 16 folder.
It's done and your controller will work
I've done that with my PS2 Controller (best controller ever) on PC for FIFA 12 and since that only need to copy the button data files when a new FIFA comes out.
I use the PS4 controller on my PC connected with a USB cable (you can use bluetooth) then use inputmapper to configure http://inputmapper.com